Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------------------MTRREVIVFLEN----QGAIVQGYVSSQ----TEILLAGHKQLDLFEPDKRSRKYEAALSRIATGQAITILSEEAFFNLVKTSQI-----
2EE3 Chain:A ((1-108))
GSSGSSGLAPPRHLGFSDVSHDAARVFWEGAPRPVRLVRVTYVSSEGGHSGQTEAPGNATSAMLGPLSSSTTYTVRVTCLYPGGGSSTLTGRVTTKKAPSPSSGPSSG
General information:
TITO was launched using:
RESULT:
Template:
2EE3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13337 for 473 contacts (-28.2/contact) +
2D Compatibility (PS) -8259 + (NN) -425 + (LL) 0
1D Compatibility (HY) 400 + (ID) 650
Total energy: -22271.0 ( -47.08 by residue)
QMean score : 0.200
(partial model without unconserved sides chains):
PDB file :
Tito_2EE3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EE3-query.scw
PDB file :
Tito_Scwrl_2EE3.pdb
: