Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRIQTTNLDKGGGGKSSHTYNEGDWLSRVMGKRVLLIDGARECNLTHSFDVTSDKTIYDIFIT---------GEYEICRINDKLSLIRGDERLTDEQLDLASRNNKYLQLFMWFSEHYE--ELAEQFDIILIDTHNDES-LVTANCIAVSDIVLGVTDASTNGFRAWLALKKFVDDIKNEAIEVITKKSYVKAEAYLIGNKIEYYGNNVTETCKQFLDVVQEDEAYLGSIQKKELMAKSLVINQSVFEQREHMTEKQKQDHQKFYDNIEYVYQNILTVLEGETK |
| 2YNM Chain:A ((34-283)) | ALVIAV-YGKGGIGKSTTSSNLSAAFSKL-GKKVLQIGCDPKHDSTFTLTHKMVPTVIDILEEVDFHSEELRPQDFMFEGFNGVQCVESGGPPAGTGCGGYV----TGQTVKL----LKEHHLLEDTDVVIFDVLGDVVCGGFAAPLQHANYCLIVTANDFDSIFAMNRIVAAINAKAKNYK---------VRLGGVIANRSA----ELD-QIEKFNEKT--GLKTMAHFRNVDAIRRSRLKKCTIFEMDPE-E----EGVLEVQNEYLSLAKKMIDNVEPLEA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YNM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -64936 for 2098 contacts (-31.0/contact) +
2D Compatibility (PS) -24849 + (NN) -3330 + (LL) 2140
1D Compatibility (HY) -5600 + (ID) 1750
Total energy: -98325.0 ( -46.87 by residue)
QMean score : 0.346
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