Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRKQFIKLGIATLLTVISLYTPINLATNHTTENIVTAQEYKTKENGTLPFKHKRQLVLGELDDKGRATFAHIQLKVKDEPKKKRVKRLKTTPVGWHNFKFYYNDGTQKAWLMSRGRLICHQFSG-------LNNERKNLVPMTNWLNTGNYNSTNSSNPESMLFYEKQLKTWLSTHKNYYLDYKVTPIYQNNE-LIPRKIELKYVGIDKTGKLLPIFIGNKSTQDQFGISTVTLENTSPNATIDYLSGKAQNTVLSAKEQRKLIAKHEEEKRLAEKKVEEEKAAAETQKKLEEEQARLAAEAQRKQKEEQARLAAETQKKQETLVQEQTSQGYKRDYRGRWHRPNGQYASKAEIAAAGLQW |
| 3OWV Chain:A ((20-248)) | ---SEAPSQALAESVLTDAVKSQIKGSLEWNGSGAFIVNGNKTNLDAKVSSKPYADNKTKTVGKETVPTVANALLS-------KATRQYSWTPPGWHQVKNLKGSYT---HAVDRGALLGYALIGGLDGFDASTSNPKNIAVQTAWANQAQAEYSTG-----QNYYESKVRKALD--QNKRVRYRVTLYYASNEDLVPSASQIEAKSSDGELEFNVLVP-----------------NVQKGLQLDYRTGEVTVTQ----------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OWV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -58352 for 1787 contacts (-32.7/contact) +
2D Compatibility (PS) -21892 + (NN) -368 + (LL) 11612
1D Compatibility (HY) 1600 + (ID) 2150
Total energy: -69550.0 ( -38.92 by residue)
QMean score : 0.287
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