Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKIISLGEVLLRLSPPQYHTLMQANHLKCQFGGSELNVLASLAQLGHHVGLVSALPDNDLGKMARQFILSQQISPAAIIK-KEGRLGIYYYEQGFSVRTNKVIYDRNYSSFWESTLSDYDFTSIFKGVDWFHVSGITPALTKDLYEVTRFLMTKAKEGGVKVSIDLNFRESLWSSFQEAREQLSPLLGLLDVCFGLEPIYLAGESEDLKDELGLSRPYLDIELLEKITQKIVQEYGLDYIAFTQREMEYTNQYMLKSYLYHNNMLYQTDKTGVEVLDRVGTGDAFAAGLIHALLEKE--------------TPQRALEIAMATFKYKHTIQGDINIMTR-DDIAYLIEKETNDIKR |
| 3LJS Chain:A ((4-331)) | KKTILCFGEALIDMLAQPLVKKGMPRAFLQCAGGAPANVAVAVARLGGAVQFVGMLGSDMFGDFLFDSFAEAGVVTDGIVRTSTAKTALAFVALDAHG-ERSFSFYRPPAADLLFRVEHFQDA-SFSDALIFHACSNSMTD-ADIAEVTFEGMRRAQAAGAIVSFDLNFRPMLWPNGENPASRLWKGLSLADVVKLSSE--------ELDYLANTLAA-----DANAVIQQLWQG-RAQ-----LLLVTDAAGP---VHWYTRTAGGEVPT-----------GDAFVGGMLYTFAQQFDDAAALIDFCHDPESIVSTLRFAAAVGALAV----AFTAMPMLSEVLSLIQEQSE---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LJS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -134084 for 2469 contacts (-54.3/contact) +
2D Compatibility (PS) -32432 + (NN) -14192 + (LL) 3548
1D Compatibility (HY) -6800 + (ID) 2800
Total energy: -186760.0 ( -75.64 by residue)
QMean score : 0.397
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