Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLYPLLTKTRNTYDLGGIWNFKLGEHNPNE----LL-P-SDEVMVIPTSFND-LMVSKEKRDYIGDFWYEKVIEVPKVSEDEEMVLRFGSVTHQAKIYVDGVLVGEHKGGFTPFEVLVPECKYNNEKIKVSICANNVLDYTTLPVGNYSEIIQEDGSIKKKVRENFDFFNYAGVHRPLKLMIRPKNHIFD-------ITITSRLSD-DLQSADLHFLVETN---QKVDEVRISVFDEDNKLVG-------------ETKDSRLFLSDVHLWEV-LNAYLYTARVEIFVDNQLQDVYEENFGLREIEVT-NGQFLLNRKPIYFKGFGKHEDTFINGRGLNEAANLMDLNLLKDIGANSFRTSHYPYSEEMMRLADRMGVLVIDEVPAVGLFQNFNASLDLSPKDNGTWSLMQTKAAHEQAIQELVKRDKNHPSVVMWVVANEPASHEAGAHDYFEPLVKLYKDLDPQKRPVTLVNILMATPDRDQVMDLVDVVCLNRYYGWYVDHGDLTNAEVGLRKELLEWQDKFPDKPIIITEYGADTLPGLHS--------TWNIPYTEEFQCDFYEMSHRVFDGIPNLVGEQVWNFADFETNLMI--LRVQGNHKGLFSRNRQ-PKQVVKEFKKRWMTIPHYHNKKNSVK |
| 3FN9 Chain:A ((3-585)) | -------LARQVTAFNTGWQFKKGPFATDPMRAASQWDGKWETVEIPHTWNAMDMQVQSGSFYEGAGYYRKTQFFPHDLEGKRVFLRFEGVGACAEVYVNGKLAGTHKGGYSAFACEIGTALKLGAENEIIVKADNKARPDVIPVN------------------QNLFGVYGGIYRPVWLIVTEQNNITVTDCASPGVYITQKDVSKKSADITVKVKLDNAGLQPAAVTLENTIYTQEGQKVGTHSRSFDLSPQGTQTYLSTFKLKNPHLWQGRKDPYLYKVVCRLMADGKVIDEVVQPLGVRKYEIVAGKGFFLNGEKYSMYGVTRHQDWWGLGSALKNEHHDFDLAAIMDVGATTVRFAHYQQSDYLYSRCDTLGLIIWAEIPCVNRV------------------TGYETENAQSQLRELIRQSFNHPSIYVWGLHNEVYQPHEYTAALTRSLHDLAKTEDP-DRYTVSVNGYGHM--DHPVNLNADIQGMNRYFGWYEKK--IQ----DIKPWVEQLEKDYPYQKLMLTEYGADANLAHQTEYLGDALNWGKPFYPETFQTKTHEYQWSIIKDHPYIIASYLWNMFDFAVPMWTRGGVPARNMKGLITFDRKTKKDSYFWYKANWSEEPVLYLTQRRNA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FN9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -208250 for 4619 contacts (-45.1/contact) +
2D Compatibility (PS) -57292 + (NN) -11043 + (LL) 2224
1D Compatibility (HY) -22000 + (ID) 6700
Total energy: -303061.0 ( -65.61 by residue)
QMean score : 0.478
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