Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNTNDFDFYLPEELIAQTPLEKRDASKLLVIDHKNKTMTDSHFDHILDELKPGDALVMNNTRVLPARLYGEKPDTHGHIELLLLKNTEGDQWEVLAKPAKRLRVGTKVSFGDGRLIATVTKELEHGGR--IVEFSYDGIFLEVLESLGEM-PLPPYIHEKLED----RDRYQTVYAKENGSAAAPTAGLHFTKELLEKIETKGVKLVYLTLHVGLGTFRPV--SVDNLDEH----------------------EMHSEFYQLSKEAADTLNAVKESGGRIVAVGTTSIRTLETIGSKFNGELKA-----DSGWTN--IFIKPGYQFKVVDAFSTNF------HLPKSTLVMLVSAFAGRDFVLEAYNHAVE------ERYRFFSFGDAMFVK------- |
| 3V7I Chain:A ((0-389)) | --AMAAYLCAPAVIHGEHSVETREIVEEVRGRHPHAPW--------APRIDGIAASTGIESRGWMLPLEAAVAPGGGG-DLGAAREALEQDANRAIAALKAVPASQTVQERTAPAWEAVQAYGERAARGALQIAGLDVADVDCLITSNSTTPALPGLDVALANRLPLRGDTMLLPATQWA-CVAGTRSLALAADLVAA--DPDRVVLVVISEALSTTYQPADDTLESLIVRLLFADTAVAAVVTGRPRPESVLRLDAAWHHTLPGTRDLHRLETRADGTHFVMDRRGPRAVQETVTAMWEWLRVRYEDDPSSWHPDVLLAHPG-GTRVLEYMEQTMPDEWPSGLLSYSRDSYTSGNRGGAAVFDILRRAHDAGQKTGSRAVLYAAAPGLTATALEGEWL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3V7I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 24404 for 2628 contacts (9.3/contact) +
2D Compatibility (PS) -34357 + (NN) -3584 + (LL) 1000
1D Compatibility (HY) 16000 + (ID) 1300
Total energy: 2163.0 ( 0.82 by residue)
QMean score : 0.034
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