Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIKKLLGLTTTVVISALILGACGQSKNEDAKVVRVGTMVKSKTEKARWDKIEELVKKKGVKLKFTEFTDYTQPNKALESDEIDINAFQHYNYLNNWNKANKTNLVSVAETYFTSFRLYSGTKNGKGKYQTVSEIPNKATITIPNDAVNESRSLYLLQSAGLLKLKVSGDTL-ATMSDVVSNPKSLDLKEVDAAQTARSLDSTDAAVINNDFVTEAGINPKSAIFIEPKSKNAKQWYNLLVAQKGWQDKSKAKAIKEVVKAYHTDAVKKVIEKTSQGLDQPVW |
| 3GXA Chain:B ((35-258)) | ------------------------------------GDMVK--------EQIQPELEKKGYTVKLVEFTDYVRPNLALAEGELDINVFQHKPYLDDFKKEHNLDITEVFQVPTAPLGLYP------GKLKSLEEVKDGSTVSAPNDPSNFARVLVMLDELGWIKLKDGINPLTASKADIAENLKNIKIVELEAAQLPRSRADVDFAVVNGNYAISSGMKLTEALFQEP-SFAYVNWSAVKTADK------DSQWLKDVTEAYNSDAFKAYAHKRFEGYKSPAA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GXA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -42789 for 1763 contacts (-24.3/contact) +
2D Compatibility (PS) -23708 + (NN) -8796 + (LL) 3760
1D Compatibility (HY) -13200 + (ID) 4000
Total energy: -88733.0 ( -50.33 by residue)
QMean score : 0.431
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