Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLFLIMMERAGLIILLAYAFVHIPFIKQTLKQPELKKHQYILLILFSLFAIISNFTGVEIQSDLSIIPQTLNHIADQSSVANTRVLTIGVSGLIGGPIVGIIVGLLSVFVRYLQGGLAPHIYVISSLLIGLCSGLSGNYLRKNYNKIRVLDAMVVGFGMEILQMICILIFSVDFNQALRLVSFISMPMILSNTLGLGIFISIISSTQKLEEHAKAFQTHQVLELANLTLPYLRKGLTTESCQPVAEIIHKHMDVSAVSLTSQSAILAYVGDGADHHLPNTQILTKLAKRAIDTGKVSVATDKSEIECDHKNCPLSSAIVIPLHIHDVIVGTLKLYFSDAQHMTYVDRQLAEGLGNIFSTQLALGQAEEATRLLQDAEMKSLQAQVNPHFLFNALNTIYGLIRM-------------------------DSEKARKLVQDFSKVIRANLQRAKQN-------LIPLHDELEQVNAYLALEEARFP---NMVAFN---LDNQTNSDDNLMIPP----FTLQVLIENSYKHAFKHVNKN-------NQLKVTIARNNDRLHIIVQDNGIGIPKEKLITLGKKTQISK-------------QGSGTAIENLVRRLNIIYDGQASLKFESN-DSGTCAIVNIPIKN |
| 2Q8G Chain:A ((111-363)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DTVIRIRNRHNDVIPTMAQGVIEYKESFDPVTSQNVQYFLDRFYMSRISIRMLLNQHSLLFG--------KHIGSINPNCNVLEVIKDGYENARRLCDLYYINSPELELEELNAKSPG-QPIQVVYVPSHLYHMVFELFKNAMRAT----MEHHANRGVYPPIQVHVTLGNEDLTVKMSDRGGGVPLRKIDRLFNYMYSTAPRPRVETSRAVPLAGFGYGLPISRLYAQY-FQG--DLKLYSLEGYGTDAVIYIKALS |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Q8G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -41893 for 1239 contacts (-33.8/contact) +
2D Compatibility (PS) -18894 + (NN) -7368 + (LL) 33696
1D Compatibility (HY) -4400 + (ID) 1300
Total energy: -40159.0 ( -32.41 by residue)
QMean score : 0.462
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