Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLSVLDYGLIDYGKTASDAIQETILLSQEAERLGYHQFWVAEHHGVKA---FSISNPELMIMHLANQTKSIKIGSGGIMPLH-YSSFKLAETLKTLETCHPNRVSIGLGNSLGTVKVSNALRSLH---K-AHDYEEVLEELKSWLIDK--SSSKE------PL-VQPTLSSFPDLYVLGSGQKSAYLAAKLGLGFTFGVFPFMDKDPLTEAK-KLSSLYYHQFEEYYPNKS-PNLMVAAFVVIADTSEEAENIAKTLDIWMLGNKDFNEFATFPTIEEAN--HYQLTPEQKAKIKSNRHRMIVGDPKQVKDSLDALVNASQAEELLLIPLVPGLDQRIKSLKLLSQLY |
| 1RHC Chain:A ((3-324)) | TQIGYFASLEQY-------RPMDALEQAIRAEKVGFDSVWVDDHFHPWYHDNAQSAQAWAWMGAALQATKKVFISTCITCPIMRYNPAIVAQTFATLRQMYPGRVGVAVGAGEAMN-EVPVTGEWPSVPVRQDMTVEAVKVMRMLWESDKPVTFKGDYFTLDKAFLYTKPDDEVPLYFSGMGPKGAKLAGMYGDHLMTVAA---APS---TLKNVTIPKFEEGAREAGKDPSKMEHAMLIWYSVDPDYDKAVEALRFWAGCLVPSMF--KYKVYDP-KEVQLHANLVHCD---TIK--ENYMCATDAEEMIKEIERFKE-AGINHFCLGNSSP---DVNFGIDIF-KEV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RHC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -151723 for 2603 contacts (-58.3/contact) +
2D Compatibility (PS) -32360 + (NN) -14585 + (LL) 948
1D Compatibility (HY) -4000 + (ID) 2050
Total energy: -203770.0 ( -78.28 by residue)
QMean score : 0.526
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