Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIDTFKVKWFKRGMSLLVLILVFFLGLGFGQMGNSSQSKDRPKQTATKKTRTNTITQTQVKEFLVAYYT-KKDLEENRNRYKDYMTEGLYNATISEENKAQNQAYRGFVVNFEFQDANIYIDQVHK----QVICEVTYTNDLLQKKNNKDGAQIGVVNHTTIQLA-----YTKLNGKYLINQMSTI----LLTDSANPSEETESYGAIAPSNTKD |
| 4QGN Chain:A ((5-182)) | MVQAWY-------------------------MDDAPGDPRQPH----RPDPGRPVGLEQLRRLGVLYWKLDADKYENDPELEKIRRERNYSWMDIITICKDKLP------NYEEKIKMFYEEHLHLDDEIRYILDGSGYFDVRDKEDQ--WIRIFMEKGDMVTLPAGIYHRFTVDEKNYTKAMRLFVGEPVWTAYNRPADHFEARGQYVKFLAQT |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QGN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 13647 for 1104 contacts (12.4/contact) +
2D Compatibility (PS) -17530 + (NN) 2046 + (LL) 3252
1D Compatibility (HY) -6800 + (ID) 1300
Total energy: -6685.0 ( -6.06 by residue)
QMean score : 0.149
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