Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNKGLIATLILLTILVVGELFYNKSEKHLNLSEKQVVKIGILQYV--PHDALDAIEKGVEDGLAQEGYKGKKVKLTVLNAEADQSKIQAMSKQLVNHHNDILIGIATPS-A-QGLAAST--KDTPIIMGAVSDPLGAKLVTNMKKPTTNVTGLSNVVPTKQTVQLIKDITPNVKRIGILYASSEDNSVSQVTEFTKYAQKA-GLEVLKYSV--PSTNEIKTSMSVM---TKKVDAVFVPQDNTIASAFRTVIVAANQANIPVYSSVDTM-----VEQG-SIASVAQSQYGLGLETAKQAIKVLRGKPVKDVPVKVIDTGKPSLNLKAAKHLGIKIPKKIMKQAEITVKVDD |
| 1JX6 Chain:A ((38-338)) | -------------------------------KPTQRPIKISVVYPGQQVSDYWVRNIASFEKRLYKLNIN-YQLNQVFTRPNADIKQQSLSLMEALKSKSDYLIFTLDTTRHRKFVEHVLDSTNTKLILQNITTPVRE-W---DKHQPFLYVGFDHAEGSRELATEFGKFFPKHTYYSVLYFSEGYISDVRGDTFIHQVNRDNNFELQSAYYTKATKQSGYDAAKASLAKHPDVDFIYACSTDVALGAVDALAELGR-EDIMINGWGGGSAELDAIQKGDLDITVMRMNDDTGIAMAEAIKWDLEDKPVPT----VYSGDFEIVTKADSPERIEALKKRAFRYSD------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JX6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -61073 for 2352 contacts (-26.0/contact) +
2D Compatibility (PS) -30055 + (NN) -9710 + (LL) 4168
1D Compatibility (HY) -3200 + (ID) 1800
Total energy: -101670.0 ( -43.23 by residue)
QMean score : 0.449
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