Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIGIDKIGFATSQYVLEMTDLAIARQVDPEKFSKGLLLDSLSITPVTEDIVTLAASAANDILS--DEDKETIDMVIVATESSIDQSKAASVYVHQLLEIQ--PFARSFEMKEACYSATAALDYAKLHVEKHP--DSKVLVIASDIAKYGIKSTGESTQGAGSIAMLISQNPSILELKE-DRLAQTRDIMDFWRPNY-SDVPYVNGMFSTKQYLDMLKTTWKEY------QKRFNTSLSDYAAFCFHIPFPKLALK-GFNKILD--------------------------------NNLD---EQKKAELQENFEHSITYSKKIGNCYTGSLYLGLLSLLENSQN-LKAGDQIAFFSYGSGAVAEIFTGQLVDGYQN-----KLQS-DRMDQLNKRQKITVTEYEKLFFEKTILDENGNANFNT--------YRTGTFSLDSIC-EHQRIYKKINN |
| 2F82 Chain:A ((3-451)) | KNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQDCLAFCTELEDVISMSFNAVTSLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEKCGNTDVEGVDSTNACYGGTAALLNCVNWVESNSWDGRYGLVICTDSAVYAEG-PARPTGGAAAIAMLIGPDAP-IVFESKLRGSHMAHVYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKHLCNKFEKLEGKEFSINDADYFVFHSPYNKLVQKSFARLLYNDFLRNASSIDEAAKEKFTPYSSLSLDESYQSRDLEKVSQQLAKTYYDAKVQPTTLVPKQVGNMYTASLYAAFASLVHNK-HSDLAGKRVVMFSYGSGSTATMFSLRLCENQSPFSLSNIASVMDVGGKLKARHEYAPEKFVETMKLMEHRYGAK--EFVTSKEGILDLLAPGTYYLKEVDSLYRRFYGKK-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2F82.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -129445 for 3375 contacts (-38.4/contact) +
2D Compatibility (PS) -40735 + (NN) -12980 + (LL) 200
1D Compatibility (HY) -19200 + (ID) 5150
Total energy: -207310.0 ( -61.43 by residue)
QMean score : 0.406
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