Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKKIILKSSVLGLVAGTSIMFSSAFADQVGVQVIGVNDFHGALDNTGTANMPDGKVTNAGTAAQLDAYIDDAQKDFKQTNPNGESIRVQAGDMVGASPANSGLLQDEPTVKTFNAMNVEYGTLGNHEFDEGLAEYNRIVTGKAPAPDSNINNITKSYPHEAAKQEIVVANVIDKVNKQIPYNWKPYAIKNIPVNNKSVNVGFIGIVTKDIPNLV-LRKNYEQYEFLDEAETIVKYAKELQAKNVKAIVVLAHVPATSKDDIAE------GEAAEMMKKVNQLFPENSVDIVFAGHNHQYTNG--LVGKTRIVQALSQGKAYADVRGVLDTDTQDFIETPSAKVVAVAPGKKTGSADIQAIVDQANTIVKQVTEAKIGTAEVSGMITRSVDQDNVSPVGSLITEAQLAIARKSWPDIDFAMTNNGGIRADLLIKPDGTITWGAAQAVQPFGNILQVVEITGRDLYKALNEQYDQKQNFFLQIA-GLRYTYTDNKEGGEETPFKVVKAYKSNGEEINPDAKYKLVINDFLFGGGDGFASFRNAKLL--GAINPDTEVFMAYITDLEKAGKKVSVPNNKPKIYVTMKMVNETITQNDGTHSIIKKLYLDRQGNIVAQEIVSDTLNQTKSKSTKINPVTTIHKKQLHQFTAINPMRNYGKPSNSTTVKSKQLPKTNSEYGQSFLMSVFGVGLIGIALNTKKKHMK |
| 3IVE Chain:A ((4-501)) | ----------------------------AKDVTIIYTNDLHAHVEPYKVPWIA-DGKRDIGGWANITTLVKQEKAK------NKATWFFDAGDYFTGPYI-SSLTKGKAIIDIMNTMPFDAVTIGNHEFDHGWDNTLLQLS--------------------QAKFPIVQGNIFYQNSSK-SFWDKPYTIIEKD----GVKIGVIGLHGVFAFNDTVSAATRVGIEARDEIKWLQRYIDELK-GKVDLTVALIHEGVPARQSSM-DVRRALDKDIQTASQ------VKGLDILITGHAHVGTPEPIKVGNTLILSTDSGGIDVGKLVLDYKEKPHNFTV-KNFELKTIYADEWKPDQQTKQVIDGWNKKLDEVVQQTVAQSPVEL--KR--AYGESASLGNLAADALLAAAGK---NTQLALTNSGGIRNEI---PAGAITMGGVISTFPFPNELVTMELTGKQLRSLMEHGASL-SNGVLQVSKGLEMKYDSSKPV----GQRVITLT-LNGKPIEDATVYHIATQSFLADGGDGFTAFTEGKARNITGGYYVYHAVVDYFKAG----NTITDEQLNGMRVKDIK--------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IVE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -108424 for 4432 contacts (-24.5/contact) +
2D Compatibility (PS) -52657 + (NN) -26840 + (LL) 11832
1D Compatibility (HY) -16000 + (ID) 5750
Total energy: -197839.0 ( -44.64 by residue)
QMean score : 0.489
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