Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKGQVNDTKQSYSLRKYKFGLASVILGPFIMVTSPVFADQTTSVQVNNQTGTSVDANNSSNETSASSVITSNNDSVQASDKVVNSQNTATKDITTPLVETKPMVEKTLPEQGNYVYSKETEVKNTPSKSAPVAFYAKKGDKVFYDQVFNKDNVKWISYKSFCGVRRYAAIESLDPSGGSETKAPTPVTNSGSNNQEKIATQGNYTFSHKVEVK-NEAKVASPTQFTLDKGDRIFYDQILTIEGNQWLSYKSFNGVRRFVLLGKASSVEKTEDKEKVSPQPQARITKTGRLTISNETTTGFDILITNIKDDNGIAAVKVPVWTEQGGQDDIKWYTAVTTGDGNYKVAVSFADHKNEKGLYNIHLYYQEASGTLVGVTGTKVTVAGTNSSQEPIENGLAKTGVYNIIGSTEVKNEAKISSQTQFTLEKGDKINYDQVLTADGYQWISYKSYSGVRRYIPVKKLTTSSEKAKDEATKPTSYPNLPKTGTYTFTKTVDVKSQPKVSSPVEFNFQKGEKIHYDQVLVV---DGHQWISYKSYSGIRRYIEI |
2ZB6 Chain:A ((12-462)) | -----VAAEELMNALSKGNCS-----------------GPTTIRGQFSNMSLSLLDLYLGRG-YNVSSIVTMTSQGMYGGTYLVEKPNL-SQLSMYRVFEVGVIRN---PGLGAPVFHMTNYLEQPVSNDLSNCMVAL-GELKLAALCHGEDSITIPYQGSGKGVSFQLVKLGVWKS-------PTDMQSWVPLSTDDPVIDRLYLSSHRGVIADNQAKWAVPTTRTDDKLRMETCFQQAC-----------------------KGKIQALCENPEWAPLKDNRIPSYGVLSVDLSLTVELKIKIASGFG---------PLITHGSGMDLYK-----SNHNNVYWLTIPPMKNL--------------ALGVINTLEWIPRFKVSPYLFTVPIKEAGGDCHAPTYL-PAEVDGDVKLSSNL-------------VILPGQDLQYVLATYDTSRVEHAVVYYVYSPS-----------------RSFSYFYPFRLPIKGVP-IELQVEC-FTWDQKLWCRHFCVLADSESGGHITHSGMVGMGVSCT- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZB6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 129909 for 3485 contacts (37.3/contact) +
2D Compatibility (PS) -45949 + (NN) -15484 + (LL) 7084
1D Compatibility (HY) -13200 + (ID) 3800
Total energy: 58560.0 ( 16.80 by residue)
QMean score : 0.139
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