Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKATFTRNQSGYLYSAEISGHAGSGEYGFDVICAAVSTLSINFINSLEALTTCQAQLIINDVEGGYMKIDLSSIPQHKEDKVQLLFESYLLGMTN--LSKDSSEFVSTIVMTH-
4QNH Chain:B ((2-96))
GRKLELTKAED-------------------TQLTKRVKNAAANVLRETWLIYKNTKLV---------KKIDHAKVRKHQRKFLQAIHQLRSVKMEQRKLNDQANTLVDLAKTQLE
General information:
TITO was launched using:
RESULT:
Template:
4QNH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14590 for 438 contacts (-33.3/contact) +
2D Compatibility (PS) -8206 + (NN) 2190 + (LL) 680
1D Compatibility (HY) 400 + (ID) 600
Total energy: -20126.0 ( -45.95 by residue)
QMean score : 0.050
(partial model without unconserved sides chains):
PDB file :
Tito_4QNH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QNH-query.scw
PDB file :
Tito_Scwrl_4QNH.pdb
: