Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQYSEIMIRYGELSTKKKNRMRFINKLKNNMEHVLSIYPDVSVKTDRDRGHVYLNGTDYHEVAESLKEIFGIQAFSPSFKVEKNVDTLVKAVQEIMTSVYKDGMTFKITAKRSDHSFELDSRALNHTLGDAVFSVLPNIKAQMKQPDINLKVEIRDEAAYISYENIRGAGGLPVGTSGKGMLMLSGGIDSPVAGYLALKRGVDIEAVHFASPPYTSPGALKKAHDLTRKLTKFGGNI-QFIEVPFTEIQE---EIK---------EKAPEAYLMTLTRRFMMRI-TDRIRENRNGLVIINGESLGQVAS------QTLESMQAIN---AVTATPIIRPVVTMDKLEIIDIAQKIDTFDISIQPFEDCCTIFAPDRPKTNPKIKNTEQYEKRMDVEGLVERAVAGIMVTTIQPQADSDDVDDLIDDLL |
| 2PG3 Chain:A ((2-180)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKRAVVVFSGGQDSTTCLIQALQDYDDVHCITFDYG-QRHRAEIEVAQELSQKL---G--AAAHKVLDVGLLNELATSSLTRDSIPVPD------NTFVPGRNILFLTLASIYAYQVGAEAVITGVCETDFSGYPDCRDEFVKALNQAIVLGIARDIRFETPLMWLNKAETWALADYYQQLDTVRYHTLTCYNGIKGDGCGQCAACHLRANGLAQYQKDAATVMASLKQKVGL------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PG3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -55021 for 1073 contacts (-51.3/contact) +
2D Compatibility (PS) -15933 + (NN) -5423 + (LL) 13232
1D Compatibility (HY) -4800 + (ID) 1150
Total energy: -69095.0 ( -64.39 by residue)
QMean score : 0.497
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