Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSYEKLLERFLTYVKINTRSNPNSTQTPTTQSQVDFALTVLKPEMEAIGLKDVHYLP---------------------SNGYLVGTLPATSDRLCHKIGFISHMDTAD-FN-AENITPQIV-DYKGGDIELGDSGYILSPKDFPNLNNYHGQTLITTDGKTLLGADDKSGIAEIMTAMEYLASHPEIEHCEIRVGFGPDEEIGI-GADKFDVKDFDVDFAYTVDGGPLGELQYETFSAAGLELTFEGRNVHPGTAKNQMINALQLAMDFHSQLPENERPE------QTD----GYQGFYHLYDLSGT------VDQAKSSYIIRDFEEVNFLKRKHLAQDIADNMNEALQ---SERVKVKLYD-QYYNMKKVIEKDMTPINIAKEVMEEL-DIKPIIEPIRGGTDGSKIS-FMGIPTPNLFAGGENMHGRFEFVSLQTMEKAVDVILGIVAKD |
| 3PFO Chain:A ((25-426)) | --FNDQVAFLQRMVQFRSVRGE----------EAPQQEW-LAQQFADRGYK-VDTFSLADVDIASHPKAAPMDTIDPAGSMQVVATADSD--GKGRSLILQGHIDVVPEGPVDLWSDPPYEAKV--------------------------RDGWMIGRGA----QDMKGGVSAMIFALDAIRTAGYAPDARVHVQTVTEEESTGNGALSTLMRGYRADACLIPEPTG-HTLTRAQVGAVWFRLRVRGTPVHVA-YSETGTSAILSAMHLIRAFEEYTKELNAQAVRDPWFGQVKNPIKFNVGIIKGGDWASSTAAWCELDCRLGLLTGDTPQEAMRGIEKCLADAQATDSFLSENPAELVWSGFQADPA--VCEPGGVAEDVLTAAHKAAFNAPLDARLSTAVNDTRYYSVDYGIPALCYGPYGQGPHAFDERIDLESLRKTTLSIALFVAEW |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PFO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -105670 for 3037 contacts (-34.8/contact) +
2D Compatibility (PS) -38049 + (NN) -10354 + (LL) 988
1D Compatibility (HY) 0 + (ID) 2400
Total energy: -155485.0 ( -51.20 by residue)
QMean score : 0.443
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