Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKNTWKKLLVSTAALSVVAGGAIAATHSNSVDAASKTTIKLWVPT--DSKASYKAIVKKFEKENKGVTVKMIESNDSKAQENVKKDP--SKAADVFSLPHDQLGQLVESGVIQEIPEQYSKEIAKNDTKQSLTGAQYKGKTYAFPFGIESQVLYYNKTKLTADDVKSYETITSKGKFGQQ-----LKAA---NSYVTGPLFLSVGDTLFGKSGEDAKGTNWGNEAGVSVLKWIADQKKNDGFVNLTAENTMSKFGDGSVHAFESGPWDYDAAKKAVGEDKIGVAVYPTMKIGDKEVQQKAFLGVKLYAVNQAPAGSNTKRISASYKLAAYLTNA-ESQKIQFEKRHIVPANSSIQSSDSVQKDELAKAVIEMGSSDKYTTVMPKLSQMSTFWTESAAILSDTYSGK--IKSSDYLKRLKQFDKDIAKTK |
| 1ELJ Chain:A ((4-377)) | -----------------------------------EEGKVVIWHAMQPNELEVFQSLAEEYMALCPEVEIVFEQKP--NLEDALKAAIPTGQGPDLFIWAHDWIGKFAEAGLLEPIDEYVTEDLLNEFAPMAQDAMQYKGHYYALPFAAETVAIIYNKEMVSE-PPKTFDEMKAIMEKYYDPANEKYGIAWPINAYFISAIAQAFGGYYFDDKTE---QPGLDKPETIEGFKFFFTEIWPYMAPTGDYNTQQSIFLEGRAPMMVNGPWSINDVKKA-G-INFGVVPLPPIIKDGKEYWPRPYGGVKLIYFAAGIK-----NKDAAWKFAKWLTTSEESIKTLALELGYIPVLTKVLDDPEIKNDPVIYGFGQA---VQHAYLMPKSPKMSAVWGGVDGAINEILQDPQNADI---EGILKKYQQEILNNM |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1ELJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -25080 for 3115 contacts (-8.1/contact) +
2D Compatibility (PS) -38934 + (NN) -14551 + (LL) 2664
1D Compatibility (HY) -18400 + (ID) 3500
Total energy: -97801.0 ( -31.40 by residue)
QMean score : 0.379
|
|
|