Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------MKLLYIFEKNIILRKILITFSLIIIFLLGRYVPIPGVL----ISAYKGQDNNFATLYSTVTGGNLSQVGVFSLGIGPMMTTMILLRLFTIGKYSSGVSQKVQQFRQNVVMLVIAIIQ---GLAIAISFQYHNGFSLTKLLLATMI-------LVTGAYIISWIGNLNAEYG-----------FGGMTILVVVGMLVGQFNNIPLIFELFQDGYQ-----LAIIL------------------FLLWTLVAMYLMITFERSEYRIPVM--RTSIHNRLVDDAYMPI-------KVNASGGMAFMYVYTLLMFPQYIIILLRSIFPTNPDITSYNDYFSLSSIQGVVIYMILMLVLSVAFTFVNIDPTKISEAMRESGDFIPNYRPGKETQSYLSKICYLFGTFSGFFMAFL---------GGVPLLFALGNDDLRT---VSSMTGIF----MMITGMSFMILDEFQVIRIRKQYTSVFENEEN |
| 4L9P Chain:B ((68-519)) | VHPGIPALFREPPLIHDLLSTETTELQSETVNKCLPLLKGIHNSQKGPFNKYGIPALQ-RKDHLEYLYDSLEDYPASFVALDASRPWMVYWALAGLCLL---------GEDVTRFRERVISTFTAAQNSTGGIGGGHGQMSHVASSYAAVLSIAMVGGEEAFKLIDRKAMWKWLGKLKQPDGGFTVCEGGEEDVRGAYCAMVVHALLDLPLALPPEAEARQNGLETFTDGLPEYLSRCQTYEGGISGSPGSEAHGAYAFCALACLCLLGRPEVVVPRYMNIATLLPWLSARQYAPEGGFSGRTNKLVDGCYSHWVGN---CWPLVQAALDGTQPLAGPKRSSVGN---LYSREGLTRYILSC-------------------CQCKLGGL--RDKPGKHPDSY--HTCYALTGLSTVQYYHYCTDSSVSSKDDFSSAFSWKHDPNFASDGQGSDIGVFTENDRLVPFHPIFVIPHKSAEDIRVWFENQSFDL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4L9P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -429455 for 2987 contacts (-143.8/contact) +
2D Compatibility (PS) -36375 + (NN) 3799 + (LL) 2532
1D Compatibility (HY) -6800 + (ID) 3500
Total energy: -469799.0 ( -157.28 by residue)
QMean score : 0.296
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