Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRVHITSIYGQSPRSIALISQKLVKDVGRQLGYDEMGIYFYNDHAETHGERSTRMDGIIAGLGRGDIVVFQVPTWNSTEFDELFLDKLQAY-G-ARIITFVHDIVPLMFESNFYLLDRVIDMYNRSDVVILPTKAMHDYLIEKGMTTSKVLYQEVWDHPVNIDL-------------PRPECQKVLSFAGDIQRFP----FVNDWK------ENIPLIYYGDGSRL--------NSEANVHAQGWKDDVELMLSLSKRGGFGLCWSEDREELVERRYSRMNASYKLSTFLAAGLPIIANHDISSRDFIKQHGLGFTVET--LEEAVEKINNME--KETYDSYVENVEKIATLLRNGYITKKLLIDAVHMLYR |
| 3OKP Chain:A ((84-377)) | -------------------------------------------------------------EREIDNVWFGAAAPLA--LMA----GTAKQAGASKVIASTHGHEVGWSMLP-GSRQSLRKIGTEVDVLTYISQYTLRRFKSAFGSHPTFEHLPSGVDVKRFTPATPEDKSATRKKLGFTDTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIVGSGRYESTLRRLATDVSQNVKFLGRLEYQDMINTLA-AADIFAMPARTRG----GGLDVEGLGIVYLEAQACGVPVIAGTSGGAPETVTP-ATGLVVEGSDVDKLSELLIELLDDPIRRAAMGAAGRAHV----EAEWSWEIMGERLTNILQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OKP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127056 for 2044 contacts (-62.2/contact) +
2D Compatibility (PS) -27810 + (NN) -16411 + (LL) 5692
1D Compatibility (HY) 0 + (ID) 1300
Total energy: -166885.0 ( -81.65 by residue)
QMean score : 0.449
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