Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANASLRHQLFEKLDQKCDQMVAIRRYLHENPELSFKE---TKTAAYISDFYKGKDCHVQTQ-F---GGMNGVVVDIYGDKATDKPIKHIALRADFDALPIQEE-TGLSFASKTAGVMHACGH-D--AHTAYLLILAESLIELKSEFSGHIRILHQPAEEVPPGGAKAMIEAGCLDGIDAVLGIHVMSTMEEGTVQYHAGPIQTGRATFKVILQGKGGHG-SMPHRANDTIVAASSFVIAAQTIVSRRVNPFDTAVVTIGSFDGKGSANVIKDSVTLEGDVRVMSEETRGVVEEEFKRILDGIAQTYGVSYQLDYQNDYPVLV---NNSEVTQKVANSLKSVAIKEILDVIDCDPQTPSEDFAYYAQ-TIPACFFYVGAHEEGQPYYPHHH-PKFQIAESSLMVSAKSMATAALAMLEEGE |
| 1CG2 Chain:A ((4-392)) | ---QKRDNVLFQAATDEQPAVIKTLEKLVNIETGTGDAEGIAAAGNFLEAELKNLGFTVTRSKSAGLVVGDNIVGKIKGR-----GGKNLLLMSHMDTVYLKGILAKAPFRVE-GDKAYGPGIADDKGGNAVILHTLKLLKEYGVRDYGTITVLFNTDEEKGSFGSRDLIQEEAK-LADYVLSFEPTSA-GDEKLSL--G--TSGIAYVQVNITGKASHAGAAPELGVNALVEASDLVLRTMNIDDK----AKNLRFNWTIAKAGNVSNIIPASATLNADVRYARNEDFDAAMKTLEERAQQKKL-PEADVKVIVTRGRPAFNAGEGGKKLVDKAVAYYKEAG-GT-L--GVEERTGGGTDAAYAALSGKPVI-ESLGLPG-----FGYHSDKAEYVDISAIPRRLYMAARLIMDLGAG-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1CG2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -159893 for 3151 contacts (-50.7/contact) +
2D Compatibility (PS) -39833 + (NN) -19550 + (LL) 1672
1D Compatibility (HY) -2800 + (ID) 3200
Total energy: -223604.0 ( -70.96 by residue)
QMean score : 0.462
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