Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQVQKSFKSNTHYGTLYLVPTPIGNLDDMTFRAIRILREVDFICAEDTRNTGLLLKHFDITTKQIS-FHEHNAYDKISGLIDLLKEGRSLAQVSDAGMPSISDPGHDLVKAAIEGGIPVVSIPGASAGITALIASGLAPQPHI-FYGFLPRKKGQQITFFETKKDYPETQIFYESPFRVSDTLKHMKEIYG-DRQVVLVRELTKLYEEYQRGTISQLLGHIEKVPLKGECLIIVDGKRDTERVKDSSQQDPLVLVKEYIANGDKTNQAIKKVAKELNLNRQELYASFHDL |
| 1VE2 Chain:A ((1-225)) | -----------MRGKVYLVGAGFGGPEHLTLKALRVLEVAEVVLHDR-LVHPGVLALAKG--ELVPV--KTPQEAITARLIALAREGRVVARLK-GGDPMVFGRGGEEALALRRAGIPFEVVPGVTSAVGALSALGLPLTHRGLARSFAVATGHDPA----LPLPRADTLVLLM------GLKERLLERFPPETPLALLARVGWPGEAVRLGRVEDLPGLGE--GLPSPALLVVGKVVGLYGELLPKDHGL--------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VE2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -100004 for 1689 contacts (-59.2/contact) +
2D Compatibility (PS) -22529 + (NN) -10310 + (LL) 4668
1D Compatibility (HY) -6800 + (ID) 2150
Total energy: -137125.0 ( -81.19 by residue)
QMean score : 0.467
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