Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQLNQRQERIIDIIKQFQPITGELIAEKLGVTRAALRSDLAVLSMLGIIDAKPKVGYFYLGQYHASIGTSHFEKMTVSEIMGI-PLTVHQKDSVYDVIVHIFMEDAGCAFILDDDDFLCGVVSRKDLLKTSIGGGDLSKMPIGMVMTRMPHVTTVLENESLFAAADKLVSRKVDSLPVVRHDKQYPEKFKVIGKLSKTILASLFLEIRDY
3GBY Chain:A ((4-127))-------------------------------------------------------------------------SVTFSYLAETDYPVFTLGGSTADAARRLAASGCACAPVLDG-ERYLGMVHLSRLLEGRKGWP-TVKEKLGEELLE--TVRSYRPGEQLFDNLISVAAAKCSVVPLADEDG------RYEGVVSRKRILGFLAERI--


General information:
TITO was launched using:
RESULT:

Template: 3GBY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82809 for 897 contacts (-92.3/contact) +
2D Compatibility (PS) -12935 + (NN) 422 + (LL) 6388
1D Compatibility (HY) -2000 + (ID) 1250
Total energy: -92184.0 ( -102.77 by residue)
QMean score : 0.405

(partial model without unconserved sides chains):
PDB file : Tito_3GBY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GBY-query.scw
PDB file : Tito_Scwrl_3GBY.pdb: