Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLQNIGQTGIQATRIALGCMRMS-D-LEGKQAEEVVGTALDLGINFFDHADIYGGGLSELRFRDAIKHLNVNRDKMIIQSKCGIREG---YFDFSKEYILSSVDGILERLGTEYLDFLILHRPDVLVEPEEVAEAFTKLRAEGKVKHFGVSNQNRFQMELLQSYL----DEPLAVNQLQLSPAHTPMFDAGLNVNMLNKASIEHDDGIVDYCRLKRVTIQAWSPFQIDLSRGLFVNHPD----------------------------YKELNETIAKLAKNYNVSSEAIVIAWILRHPAQIQAIVGSMNPSRLKAIDKANDI--ALTREEWYDIYRSAGNILP |
| 3LUT Chain:A ((39-356)) | -YRNLGKSGLRVSCLGLGTWVTFGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVE----------------VQLPELFHKIGVGAMTWSP----LACGIVSGKYDSGIPPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNAEQLMENIGAIQVLPKLSSSIVHEIDSILGNKPY |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LUT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -166069 for 2449 contacts (-67.8/contact) +
2D Compatibility (PS) -29548 + (NN) -12958 + (LL) 1528
1D Compatibility (HY) -13600 + (ID) 3250
Total energy: -223897.0 ( -91.42 by residue)
QMean score : 0.470
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