Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNLPTEIRYRPYDEWTEEDKENIVKNVSKSPWRATYHLEAKTGLLNDPNGFSYFNGKFHLFYQNWPFGAAHGLKQWVHTESDDLVHFKETGIKLKPDHVNDSHGAYSGSALA-IDDKLFLFYTGNVRDMKWNRDPRQIGAWMTSD----GK-ITKFD-KVLISQ-PNDVTEHFRDPQIFNY--DNQFYAVIGAQNSKKCGFIKLYKALNNDIHHWEFVGDLDFGGTGSEYMIECPNIIFVKG---------------KPVLLYSPQGLDKNELDYQNIYPNTYKIGQYF-D--ANSSKIV--EPSPIYNLDYGFEAYATQGFNTS-DGRAFIVSWIGLPDIDYPSDQFDYQGAMSLVKELSIKN--G-NLYQYPVPAMKNLRQHQAEFKT--------Q-L-Q-TNNTYELELLVPRND---------------LSSFVLFA-NPK--GQGLSITIDTAKG----KVIVDRSQAGQQY-ATEFGTSRQCNIP-KDATSVNVFIDKSIFEIFINKGEKVFTGRVFPDAEQ---SGIQLKE---G-H--VHGKYFELKY |
| 3UGF Chain:A ((12-537)) | -------------------------NAQLSWQRTAFHFQPERSWMSDPDGPIFYKGWYHFFYQYNPDNPVWGNNTWGHTVSRDLIHWLYLPLALAADQWYDMQGVFSGSATCLPDGRIMMLYTGVTKE----MVEMLSLAYPADLSDPLLVEWVKYPGNPILSAPPGVSPTEFRDASTGWYVSNGTWRIAIGAKYN-TTGIAMVYET--KDFKSFKLLEELLHA-VPDTGLWECVDLYPVSTTGEKGLETSVNGPKVKHVLKASIDEQ----------QRDYYAIGTYDLGTNKWTPDNPEEDVGIGLRYDWG-KYYASKTFYDPKKQRRVVWAWTKELDSEVADREKGWANVQTIPRTVLLDQKTGTNVLLWPVEEVESLRLSSKEFSKVKAGAGSVVPLDVGTATQLDIIAEFEIDKGYNCTTSGGAAERGVLGPFGLLVSATENLSEQTPVYFYIAK-NFKTFFCLDESRSSKASDVSKQVKGFTVPVLDGEKFTMRLLVDHSIVESFAQGGRSCITSRVYPTEAIYGAAKLFLFNNATGASITASLKIWEMNS |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UGF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -118668 for 3609 contacts (-32.9/contact) +
2D Compatibility (PS) -46356 + (NN) -240 + (LL) 2428
1D Compatibility (HY) -22800 + (ID) 4900
Total energy: -190536.0 ( -52.79 by residue)
QMean score : 0.351
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