Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGFEQRLTRCQTAISQLSCDALLITNLTNIFYLTGFS--GT--NATVLISPKHRIFVTDSRYALIAKNTVREF--DIII---SREPLAAILKIIRD----------DALMAIGFETDISYHMYKHMVEVFEDYRLIEAPSVVEKLRMIKDATELAIIRQACRISDQAFLDVLDFIKPDRTTELQVANFLDFRMR-ELGATGPSFDFIVASGYRSAMPHGVASQKTIQSGEALTLDFGCYYQHYVSDMTRTIHIGHVTDQEREIYDIVLKSNQAIIDNVKSGMKRCDYDYLARQVIENSGYGNHFTHGIGHGMGLDVHEIPYFGK-SEGVIASGMVVTDEPGIYLDNKYGVRIEDDLLITETGCEVLTSAPKELIVL |
| 4RGZ Chain:N ((3-367)) | MDYKRRIHKFQAHFGKKGFEGALVAPGSNFYYLTGFNPLGTLERLFVLILPSEGLLTAIA--PRLYEKELEEFNGEVVLWSDSENPYKIFATKIKETFKEGEKLLIDDTMPVG--------VFLKAKDIFDKYSLHPISPVISELREIKDKDEIKAHKKAAEIVDKVFYRFIEG-KLEGKSERELANRIEYMIKNEFGADDVSFEPIVASGPNGANPHHRPSHRKIRKGDVVIFDYGAKYLGYCSDVTRTVVVGPPSEEVKKVYEIVKEAQETAVQKVAEGIPAEVVDATARGIISKYGYGEYFIHRTGHGLGIDVHEEPYISPGNKKILKDGMVFTIEPGIYLQGKFGVRIEDDVALVDKKGIRLTNADRELITL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RGZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -191013 for 2819 contacts (-67.8/contact) +
2D Compatibility (PS) -36735 + (NN) -7668 + (LL) 920
1D Compatibility (HY) -24400 + (ID) 5850
Total energy: -264746.0 ( -93.91 by residue)
QMean score : 0.466
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