Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLRRSERMVVISNYLINNPYTLTSLNTFASKYGAAKSSISEDIAIIKKAFEQAQIGDIKTVTGASGGVIFTPTIAEAEAKEIVEELRQRLSENDRILPGGYIYLSDLLSTPKMLQSIGRIVANAYRGQKIDAVMTVATKGVPLANAVANVLDVPFVIVRRDLKITEGSTVSVNYASGSSGRIEKMFLSKRSLKPNSRVLIVDDFLKGGGTVSGMISLLSEFDSTLVGVAVFAENAQEQREKM-AYKSLLRVSEIDVKNNR-VSVEAGNIFD
1O57 Chain:A ((2-271))
-KFRRSGRLVDLTNYLLTHPHELIPLTFFSERYESAKSSISEDLTIIKQTFEQQGIGTLLTVPGAAGGVKYIPKMKQAEAEEFVQTLGQSLANPERILPGGYVYLTDILGKPSVLSKVGKLFASVFAEREIDVVMTVATKGIPLAYAAASYLNVPVVIVRKD-----GSTVSINYVSGSSNRIQTMSLAKRSMKTGSNVLIIDDFMKAGGTINGMINLLDEFNANVAGIGVLVEAEGVDERLVDEYMSLLTLSTINM-KEKSIEIQNGNFLR
General information:
TITO was launched using:
RESULT:
Template:
1O57.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -190697 for 2086 contacts (-91.4/contact) +
2D Compatibility (PS) -28627 + (NN) -10375 + (LL) 872
1D Compatibility (HY) -32400 + (ID) 6600
Total energy: -267827.0 ( -128.39 by residue)
QMean score : 0.593
(partial model without unconserved sides chains):
PDB file :
Tito_1O57.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1O57-query.scw
PDB file :
Tito_Scwrl_1O57.pdb
: