Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAEITAKLVKELREKSGAGVMDAKKALVETDGDLDKAIELLREK----GMAKAAKKADRVAAEGLTGVYVDGNVAAVIEVNAETDFVAKNDQFVTLVNETAKVIAEGRPS-------------NNEEALALTM--PSGETLEQAFVTATATIGEKISFRRFALVEKTDEQHFGAYQHNG-----------GRIGVITVVEGGD-----DALAKQVSMHVAAMKPTVLSYTELDAQFVHDELAQLNHKIEQDNESRAMVNKPALPFLKYGSKAQLTDEVIAQAEEDIKAELAAEGKPEKIWDKIVPGKMDRFMLDNTKVDQEYTLLAQVYIMDDSKTVEAYLESVNAKAVAFVRFEVGEGIEKASNDFEAEVAATMAAALEK |
| 1XB2 Chain:B ((57-331)) | --ASSKELLMKLRRKTGYSFINCKKALETCGGDLKQAESWLHKQAQKEGWSKAARLHGRKTKEGLIGLLQEGDTTVLVEVNCETDFVSRNLKFQQLVQQVALGTLLHCQNLKDQLSTYSKGFLNSSELSELPAGPEREGSLKDQLALAIGKLGENMILKRAAWVKVPAGFYVGSYVHGAMHSPSLHNLVLGKYGALVICETSELKANLADLGRRLGQHVVGMAPLSVGSLDDEP---------------------------------------------------------------------------GGEAE-------TKMLSQPYLLDPSITLGQYVQPHGVSVVDFVRFECGEG---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XB2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -100493 for 1863 contacts (-53.9/contact) +
2D Compatibility (PS) -26132 + (NN) -12392 + (LL) 8652
1D Compatibility (HY) -11600 + (ID) 3700
Total energy: -145665.0 ( -78.19 by residue)
QMean score : 0.608
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