Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIMGLDVGSKTV-----GVAISDPLGFTAQGLEIIKIDE---ESGNFGFDRLAELVKEYKVDKFVVGLPKNMNNTSGP-RVEASQAYGDKIT--E--LFNLPVEYQDERLTTVQAERMLVEQADISRGKRKKVIDKLAAQLILQNYLDRMF
3PSI Chain:A ((749-856))
-KILSLTCGQGRFGADAIIAVYVNRKGDF-IRDYKIVDNPFDKTNPEKFEDTLDNIIQSCQPNAIGING----PNPKTQKFYKRLQEVLHKKQIVDSRGHTIPIIYVEDEVAIR--------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3PSI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23378 for 588 contacts (-39.8/contact) +
2D Compatibility (PS) -9944 + (NN) -466 + (LL) 4332
1D Compatibility (HY) -1600 + (ID) 600
Total energy: -31656.0 ( -53.84 by residue)
QMean score : 0.603
(partial model without unconserved sides chains):
PDB file :
Tito_3PSI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3PSI-query.scw
PDB file :
Tito_Scwrl_3PSI.pdb
: