Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNTPKKHKKFKAKMILQIIMVIIGGIIAAYGLETVLIPNSVSDGGVTGLSIVGSQLFNLPLGILIAVINIPFVWLGYKQIGKSFALLSIIGIVSLAAGTSFFHHTPAIIEGDTLLITVVGGIILGFGMGLALRNGGALDGIDMLAVLLSRKLPFGTSDLILFLNLFVFIFVSTVFGLQGALLSVIAYYIASKVIHVVEEGLSGSKTFQIITTQ--PELMVETIRDQLGRSATYKEAYGGFSH----------------EKFKEITCVINRLEETKLKEIINDIDK-----TAFVTVYDVAEVKGSNFRNLNHH
4R25 Chain:A ((5-103))-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KVEIVTRPANFEKLKQELGKIGVTSLTFSNVHGCGLQKAHTELYRGVKIESNVYERLKIEIVVSKVPVDQVTETAKRVLKTGSPGDGKIFVYEISNTIN---------


General information:
TITO was launched using:
RESULT:

Template: 4R25.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 262 -44787 -170.94 -589.30
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.46

3D Compatibility (PKB) : -170.94
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.46
QMean score : 0.466

(partial model without unconserved sides chains):
PDB file : Tito_4R25.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4R25-query.scw
PDB file : Tito_Scwrl_4R25.pdb: