Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLKKVILAAFILVGSTLGAFSFSSDASAKHVNGNITWYNGV--GKKGSSGKKLGHWDC-ATKIGFDVPRNGTKIRAYAKAKPKKVITV---YKNDVGRMPNAVLDVSPKAFKALGYPLSKGKVAGHYSY
4AVR Chain:A ((2-93))------------------------------DTGEASYYGSRHAGLRTASGERYNPNAMTAAHRTL---PFGARVRVTN-LDNRRSVVVRINDRGPFRRGRI--IDVSRKAAEGLGM-IRSGVAPVRIES


General information:
TITO was launched using:
RESULT:

Template: 4AVR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 406 -29370 -72.34 -341.51
target 2D structure prediction score : 0.77
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -72.34
2D Compatibility (Sec. Struct. Predict.) : 0.77
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.430

(partial model without unconserved sides chains):
PDB file : Tito_4AVR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4AVR-query.scw
PDB file : Tito_Scwrl_4AVR.pdb: