Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-----------------------------MKKRI-ILLLA----VIIAAAAAGVAFYVAKDKGHEKAADVSVN--------TESGDELLVSI-TDTDLLTKYYENDKVIHEEKLTSYPAFALDQKQQVLYYTGNNEQNEMRLFKLDLKSHKKTMLYKGAESADSLFLSKDRSTIYFRLGKA-DESNFRIAAFDLKTKKYKNLYPAANDQDDTVSSFFYNQKNDSFALLHYSVEEDYKKTDEANEKGIDPEPTTIH-FAEGRQNKFNELKSLNQFISDIAVSDDDKRILFTSYTQKGTEQTASIQMLNADTKKYESI-ISNQKSF------------------KLLIDAQPQFSKDGKNIYFLAEAKGAKKLKDETGREAKVRT---IYSYSLE-NKTFKKVWENPNGIINSFFVIN----------
1L0Q Chain:A ((1-391))STFAYIANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTV--TKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMS-----ISVIDTVTNSVIDTVKV----EAAPSGIAVNPEGTKAYVTNV-----------------DKYFNTVSMIDTGTNKITARIPV-GPDPAGIAVTPDGKKVYVALSFN-------TVSVIDTATNTITATMAVGKNPYASGQFIGSIPVQPVYPSADFKSNITSGYIFLSEPVQFTDLSKDATEWKWDFGDGSSSKKQNPTHTYSETGIYTVRLTVSNSNGTDSQISTVNVVLKGSPTPS


General information:
TITO was launched using:
RESULT:

Template: 1L0Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1636 -104088 -63.62 -333.61
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -63.62
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.380

(partial model without unconserved sides chains):
PDB file : Tito_1L0Q.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1L0Q-query.scw
PDB file : Tito_Scwrl_1L0Q.pdb: