Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--------MDIIR-------------------------KISHFAGQTFGIWVIVFAVLGFSFPSLFTWISSYITIF----LGIIMFGMGLTLQADDFKELVRKPWQVIIGVIAQYTIMPLVAFGLAFGLHLPA-EIAVGVILVGCCPGGTASNVM-TF-LAKGNTALSVA-VTTISTLLAPVVTPLLIMLFAKEWLPVSPGSLFISILQAVLFPIIAGLIVKMFFRKQVAKAVHALPLVSVIGIVAIVSAVVSGNR-------ENLLQSGLL----------IFSVVILHNGIGYLLGFLCAKLLKMDYPSQKAIAIEVGMQNSGLGAALATA-----------HFS------PLSAVPSAIFSVWHN----LSGS--MLATYWSKKVKKKQAGSKSSNLSL--
4OL8 Chain:A ((24-461))PVWLQQKYREIIRNDLPPPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDL-----HSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDLRFVNVYLDDILIFSE-----SPEEHWKHLDTVLERLKNENLIVK----KKKCKFEETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPITEKQDKAIDKLKDAPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSLEYPAGELELLGIIKALHHFRYMLHGKHFTLRTNHARRVQRWLDDLATYDFTLEY


General information:
TITO was launched using:
RESULT:

Template: 4OL8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1290 -68148 -52.83 -221.98
target 2D structure prediction score : 0.37
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : -52.83
2D Compatibility (Sec. Struct. Predict.) : 0.37
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.142

(partial model without unconserved sides chains):
PDB file : Tito_4OL8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4OL8-query.scw
PDB file : Tito_Scwrl_4OL8.pdb: