Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNWMEFISSIVKSIIWPVAIIILVFKLKQPVSNLISTLAKIKYKDWEFEFTIDQKLDKISFQLNKENQYGTDDQNLKDSLNLESNSEITEETHSHYNEKTSIKGDNDLLLKMEMIRLYGAVKNLYEKVSEKDDAADKSQG-----IGMLYMVDYLK---RHKILNDSFAESLLDIMNIVHDLEKSHIS----------QSYIMNKFFWNVDKSVKRLMEITSNYVAENTAGETSN
5FIK Chain:W ((10-226))------ITPVILGLPLVTLIVLFPSLLFPTSNRLVS-NRFVTLQQWMLQLVSKQMMSI-------HNSKGQTWTLMLMSLILFIGSTNLLGLLPHSFTPT---TQLSMNLGMAIPLWAGAVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRLTANITAGHLLIHLIGGATLALMSISTTTALITFTILILLTILEFAVAMIQAYVFTLLVSLYLHDNT-


General information:
TITO was launched using:
RESULT:

Template: 5FIK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain W - contact count / total energy / energy per contact / energy per residue : 703 -23999 -34.14 -120.60
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain W : 0.60

3D Compatibility (PKB) : -34.14
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.143

(partial model without unconserved sides chains):
PDB file : Tito_5FIK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5FIK-query.scw
PDB file : Tito_Scwrl_5FIK.pdb: