Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAPFGFTPKARHNRGVALRSTYRLDGWVMGPVDKEGWGLSYVFAQPSVLAAAATDLAGIGSAINQATAAVAAPTTGLAAAAADEVSTALATLFGAYGQQFQAISAQVAAFHNEFTQRLAAAANAFVNAEATNTSALVQEATAGLFKPTSPPVLPPMFNQNTAIIMGGTGSPIP-TPSYVNAITTLFIDPVVSNPVVKAL-VTPEELYPITGVKSLPFQTSVQLGLQILDGAIWEQI--NAGNHVTVFGYSQSAVIASLEMQHLISLGPNA-P-SPSQ-LNFILIGNEMNPNGGILAR---IPGLNVTTLGLPFYGA--TPDNPYPTTTYTLEYDGFADFPRYPLNVLSDINAVFGILTVHTTYADLTPAQIASATQLPTQGTTSNTYYIIETEHLPLLAPLRAIPVIGPPLAALVEPNLEVIVNLGYGDPRFGYSTSPANVPTPFGLFPDVPASVVADALVAGTQQGVNDFMVELPAALNTLPQTPMPAFPPYVPTLLPPPPPPQPATLINIADTFASVVSTGYSILLPTADLGLAFVTILPAYDLTLFVNQLAAGNLRAAIELPLAATIGLAALGGMIEFIAIVVTLADITQQLQSFSI |
| 3HC7 Chain:A ((4-174)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------PWLFTVHGTGQPDPLGPGLPADTARDVLDI----YRWQPIGNYPAAAFP--------MWPSVEKGVAELILQIELKLDADPYADFAMAGYSQGAIVVGQVLKHHILPPTGRLHRFLHRLKKVIFWGNPMRQKGFAHSDEWIHPVAAPDTLGILEDRLENLEQYGFEVRDYAHDGDMYASIKED------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HC7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -62250 for 1303 contacts (-47.8/contact) +
2D Compatibility (PS) -17885 + (NN) -17134 + (LL) 28360
1D Compatibility (HY) -2400 + (ID) 1650
Total energy: -72959.0 ( -55.99 by residue)
QMean score : 0.408
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