Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTTPGKLNKARVPPYKTAGLGLVLVFALVVALVYLQFRGEFTPKTQLTMLSARAGLVMDPGS-KVTYNGVEIGRVDTISEVTRDGESAAKFILDVDPRYIHLIPANVNADIKATTVFGGKYVSLTTPKNPTKRRITPKDVIDVRSVTTEINTLFQTLTSIAEKVDPVKLNLTLSAAAEALTGLGDKFGESIVNANTVLDDLNSRMPQSRHDIQQL----AALGDVYADAAPDLFDFLDS--SVTTARTINAQQAEL----------DSALLAAAGFGNTTADVFDRGGPYLQRGVADLVPTATLLDTYSPELFCTI--------------RNFYDADPLAKAASGGGNG----YSLRTNSEILSGIGISLLSPLALATNGAAIGIG---LVAGLIAPPLAVAANLAGALPGIVGGAPNPYTYPENLPRVNARGGPGGAPGCWQPITR----DLWPAPYLVMDTGASLAPYNHMEVGSPYAVEYVWGRQVGDNTINP |
| 4OOU Chain:A ((20-383)) | ------------SEFLKASGSNFYYGGQKVFLSGVNF--------------AWRSYGSDFGNGQYASNGPAL--KDWINKVKASGGNTARVWVHVEGQ--------------------------VSPAFDSHGFVTSTD---------SKKTLINDLSDLLDYANGQNVFLILVLFNGAL--------------------------QNNSNVQNLFWDESKLNSYINNALTPMVNALKSKPSLAAWEVLNEPEGTLQPGSDQNSCYDTSTLAAQGAG------WGGKKFPMKQILKTINWISSAIHNADSKALVTVGSWSELTQTDSFGYRNHY-KDSCLTGAGGKSNGIINFYQMHTYSH-----SGKWNQNAPFKVNRWAYNVNDKPLLIGEFASVCS------------------QNEGIQNLYKYAYNNGYNGALT-WQFNSGGDCSDTYSNQMYGMQ---ALKGQNDQSGGKGGMVSV---------NINH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OOU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -76012 for 2800 contacts (-27.1/contact) +
2D Compatibility (PS) -33942 + (NN) -6516 + (LL) 6436
1D Compatibility (HY) -12800 + (ID) 3650
Total energy: -126484.0 ( -45.17 by residue)
QMean score : 0.194
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