Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MLTRFIRRQLILFAIVSVVAIVVLGWYYLRIPSLVGIGQYTLKADLPASGGLYPTANVTYRGITIGKVTAVEPTDQGARVTMSIASNYKIPVDASANVHSVSAVGEQYIDLVSTGAPGKYFSSGQTITKGTVPSEIGPALDNSNRGLAALPTEKIGLLLDETAQAVGGLGPALQRLVDSTQAIVGDFKTNIGDVND-IIENSGPILDSQVNTGDQIERWARKLNNLAAQTATRDQNVRSILSQAAPTADEVNAVFSGVRDSLPQTLANLEVVFDMLKRYHAGVEQLLVFLPQGAAIAQTVLTPTPGAAQLPLAPAINYPPPCLTGFLPASEWRSPADTSPRPLPSGTYCKIPQDAQLQVRGARNIPCVDVLGKRAATPKECRSKDPYVPLGTN--PWFGDPNQILTCPAPGARCDQPVKPGLVIPAPSINTGLNPAPADQVQGTPPPVSDPLQRPGSGTVQCNGQQPNPCVYTPTSGPSAVYSPASGELVGPDGVKYAVANSSTTGDDGWKEMLAPAS-- |
| 4FDW Chain:A ((21-401)) | ASLEDFSIEQLP------AKTIYALG-ENIDLTGLNVTGKYD-------DGKQRPV-KVTSEQIS--GFSSSVPVDK-QEVTITIEGKQK---SFSVHISPVRVENGVLTEILKGYNEIILPNSVKSIPKD--------AFRNSQ----------------------------IAKVV---------LNEGLKSIGDMAFFNSTV---QEIVFPSTLEQLKEDIFYYCYNLKKADLSKTKITKLPASTF--VYAGIEEVL--LPVTLK---------------------------EIGSQAFLKTSQLKTIEIPENVS--------TIGQEAFR-ESGITTVKLPNGVT-NIASRA---FYYCPELAEVTTYGSTFNDDPEAM-IHPYCLEGCPKLARFEIPESI-----------RILGQGLLGGNRKVTQLTIPANVTQINFSA------FNNTGIKEVKVEGTTP-PQVFEKVWYG---FPDDITVIRVPAESVEKYKNAN-----GWRDFTNKITTF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FDW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -87487 for 3025 contacts (-28.9/contact) +
2D Compatibility (PS) -39319 + (NN) -22917 + (LL) 6528
1D Compatibility (HY) -14800 + (ID) 3850
Total energy: -161845.0 ( -53.50 by residue)
QMean score : 0.150
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