Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MWIRAERVAVLTPTASLRRLTACYAALAVCAALACTTGQPAARAADGREMLAQAIATTRGSYLVYNFGGGHPMPLLNAGGHWYEMNNGGHLMIIKNASQRLSPHLLVDTHTGDQARCEHNPGARTGEGLWQASEIYPPLKAWQRMGRPTIAVNANFFDVRGQKGGSWRSTGCSSPLGAYVDNTRGQGRANQAVTGTVAYAGKQGLSGGNELWSSLTTMILPVGGAPYVLRPKSRQDYDLATPVIEDLLNKNARFVAVAGIGLLSPGNTGQLHDGGPSAARTALAYAKQKDEMYIFQGGNYTPDNIQDLFRGLGSDTAILLDGGGSSAIVLRRDTGGMWAGAGSPKGSCDTRQVLCDSHERALPSWLAFN- |
| 1DQW Chain:A ((1-267)) | MHKATYKERAATHPSPVAAKLFNIMHEKQTNLCASLDVRTTKELLELVEALGPKICLLKTHVDILTDFSME------------------GTVKPLKALSAKYNFLLFEDRKFAD---------------------IGNTVKLQYSAGVYRIAEWADITNAHGVVG--------PGIVSGLKQAAEEVTKEPRGLLMLAEL-SCKGSLSTGEYTKGTVDIAKS--DKDFVIGFIAQRDMGGRD-------EGYDWLIMTPGVGLDDKGDALGQQYRTVDDVVST-----------------------------------------GSDIIIVGRGL------FAKGRDAKVEGERYRKAGWEAYLRRCGQQD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DQW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -78891 for 2279 contacts (-34.6/contact) +
2D Compatibility (PS) -28410 + (NN) -7718 + (LL) 3704
1D Compatibility (HY) 400 + (ID) 1550
Total energy: -112465.0 ( -49.35 by residue)
QMean score : 0.280
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