Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLGQPTRAQLAALVDHTLLKPETTRADVAALVAEAAELGVYAVCVSPSMVPVA---VQAGGVRVAAVTGFPSGKHVSSVKAHEAAAALASGASEIDMVIDIGAALCGDIDAVRSDIEAVRAAAAGAVLKVIVESAVLLGQSNAHTLVDACRAAEDAGADFVKTSTGCHPAGGATVRAVELMAETVGPRLGVKASGGIRTAADAVAMLNAGATRLGLSGTRAVLDGLS
3NGJ Chain:B ((22-238))----MDKATLAKYIDHTLLKADATEEQIRKLCSEAAEYKFASVCVNPTWVPLCAELLKGTGVKVCTVIGFPLGATPSEVKAYETKVAVEQGAEEVDMVINIGMVKAKKYDDVEKDVKAVVDASGKALTKVIIECCYLTNEEK----VEVCKRCVAAGAEYVKTSTG-FGTHGATPEDVKLMKDTVGDKALVKAAGGIRTFDDAMKMINNGASRIGASAGIAILNGI-


General information:
TITO was launched using:
RESULT:

Template: 3NGJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -146911 for 1924 contacts (-76.4/contact) +
2D Compatibility (PS) -24526 + (NN) -16904 + (LL) 776
1D Compatibility (HY) -18400 + (ID) 4800
Total energy: -210765.0 ( -109.55 by residue)
QMean score : 0.545

(partial model without unconserved sides chains):
PDB file : Tito_3NGJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3NGJ-query.scw
PDB file : Tito_Scwrl_3NGJ.pdb: