Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----MREAAQALGFEVL----DQRDLVRNLRTHYSRVFEELEARRLELEGKSSQEYLDKMRVGLKNWVEAADNGHSRVGHPTFPRTRLTPIC-----------------QLPTAAIDSTAGRRRYR------
1CQT Chain:B ((8-163))
DLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYND-FSQTTISRFEA-LNLSFKNMCKLKPLLEKWLNDAER-KKRTSIETNIRVALEKSFLENQKTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRINP
General information:
TITO was launched using:
RESULT:
Template:
1CQT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16370 for 570 contacts (-28.7/contact) +
2D Compatibility (PS) -10782 + (NN) -4514 + (LL) 124
1D Compatibility (HY) -2400 + (ID) 950
Total energy: -34892.0 ( -61.21 by residue)
QMean score : 0.383
(partial model without unconserved sides chains):
PDB file :
Tito_1CQT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1CQT-query.scw
PDB file :
Tito_Scwrl_1CQT.pdb
: