Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPCVFCAIIAGEAPAIRIYEDGGYLAILDIRPFTRGHTLVLPKRHTVDLTDTPPEALADMVAIGQRIARAARATKLADATHIAINDGRAAFQTVFHVHLHVLPPRNGDKLSVAKGMMLRRDPDREATGRILREALAQQDAAAQD
1Y23 Chain:C ((7-107))
--CIFCKIIAGDIPSAKVYEDEHVLAFLDISQVTKGHTLVIPKTHIENVYEFTDELAKQYFHAVPKIARAIRDEFEPIGLNTLNNNGEKAGQSVFHYHMHIIP-----------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1Y23.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -70450 for 693 contacts (-101.7/contact) +
2D Compatibility (PS) -11128 + (NN) -5330 + (LL) 2656
1D Compatibility (HY) -7600 + (ID) 2050
Total energy: -93902.0 ( -135.50 by residue)
QMean score : 0.394
(partial model without unconserved sides chains):
PDB file :
Tito_1Y23.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Y23-query.scw
PDB file :
Tito_Scwrl_1Y23.pdb
: