Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MADVPLDAQERLELCDLLEELGPAVATLIEGWTAHDLAAHIVLRERDLVAGLCIVLPGPFQRFAERRRARLAQSKDFTWLVARIRSGPPMGFFRIGWVRTLANLNEFFVHHEDVRRASGRGPRSLTPEMDAALWRNVRRGSHFLSRRLHGCGLEIEWVGTGKRVRVRSGEPTARLTGPPGELLLYVFGRRAVARVEVSGPLEAIAAVHRTHFGM |
| 2JHB Chain:A ((1-143)) | GSMPRVVPDQRSKFENEEFFRKLSRECEIKYTGFRDRPH---------------------------EERQTRFQNACRD--------GRSEIAFVATG--------TNLSLQFFPASWQGEQRQTPSREYVD-------------LEREAGKVYLKAPMILNGVCVIWKGWIDLHRLDG--------------MGCLEFD---EERAQQEDALAQQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JHB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -10616 for 1080 contacts (-9.8/contact) +
2D Compatibility (PS) -15267 + (NN) -6286 + (LL) 6132
1D Compatibility (HY) -4400 + (ID) 1150
Total energy: -31587.0 ( -29.25 by residue)
QMean score : 0.274
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