Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAALVREVVGDVLRGARMSQGRTLREVSDSARVSLGYLSEIERGRKEPSSELLSAICTALQLPLSVVLIDAGERMARQERLARATPAGRATGATIDASTKVVIAPVVSLAVA
2B5A Chain:D ((7-70))
----IKRKFGRTLKKIRTQKGVSQEELADLAGLHRTYISEVERGDRNISLINIHKICAALDIPASTFF--------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2B5A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29705 for 422 contacts (-70.4/contact) +
2D Compatibility (PS) -6589 + (NN) -663 + (LL) 4484
1D Compatibility (HY) -2800 + (ID) 1000
Total energy: -36273.0 ( -85.95 by residue)
QMean score : 0.575
(partial model without unconserved sides chains):
PDB file :
Tito_2B5A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2B5A-query.scw
PDB file :
Tito_Scwrl_2B5A.pdb
: