Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKSLPGVADLRLGANHPRMWTRRVQGTVVNVGVKVLPWIPTPAKRILSAGRSVIIDGNTLDPTLQLMLSTSRIFGVDGLAVDDDIVASRAHMRAICEAMPGPQIHVDVTDLSIPGPAGEIPARHYRPSGGGATPLLVFYHGGGWTLGDLDTHDALCRLTCRDADIQVLSIDYRLAPEHPAPAAVEDAYAAFVWAHEHASDEFGALPGRVAVGGDSAGGNLSAVVCQLARD---KARYEGGPTPVLQWLLYPRTDFTAQTRSMGLFGNGFLLTKRDIDWFHTQYLRDSDVDPADPRLSPLLAESLSGLAPALIAVAGFDPLRDEGESYAKALRAAGTAVDLRYLGSLTHGFLNLFQLGGGSAAGTNELISALRAHLSRV |
| 3AIL Chain:D ((41-299)) | -------------------------------------------------------------------------------ASVEE----IRSLFKQFSSLTPREEVG-KIEDITIPGSETNIKARVYYPKTQGPYGVLVYYHGGGFVLGDIESYDPLCRAITNSCQCVTISVDYRLAPENKFPAAVVDSFDALKWVYNN-SEKFNGKYG-IAVGGDSAGGNLAAVTAILSKKENIKLKY--------QVLIYPAVSFDLITKSLYDNGEGFFLTREHIDWFGQQYLR-SFADLLDFRFSPILAD-LNDLPPALIITAEHDPLRDQGEAYANKLLQSGVQVTSVRFNNVIHGFVSFF------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AIL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -134278 for 2259 contacts (-59.4/contact) +
2D Compatibility (PS) -27538 + (NN) -18913 + (LL) 6656
1D Compatibility (HY) -19600 + (ID) 5600
Total energy: -199273.0 ( -88.21 by residue)
QMean score : 0.465
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