Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDTLQGMRVFARVVDSGSFTSAAQALDLSTAQVSRLISDLEAHLQTRLLHRTTRRLALTEAGERYLERCRGILEDIEVAEAEAAGAHIRPCGRLRVQSLMGMGQHHLVPMIARYGALFPDVVIELTLSQRNPDMLEEGQDVLITGERQLPDSEFVAQRLGSIHSVLCASPGYLQQHGVPRSVDDLERHVCLRLQDPA-YPE--GWIFADEQGERTV-SPQNTFMVNVAEVMAQAAKADLGIALLPSYVAAAALRNGELLRVLPGHAMHQRTIYALYPSRRYLDAKIRTWVDLLQQELPQAFARDETTMQSSSYCAQ |
| 3MZ1 Chain:A ((85-296)) | ----------------------------------------------------------------------------------------LPKGRLRVETASAFANLVIIPALPEFHKKYPDIQIDLGVSDRT--YLAENVDCAIRAGT-LTDQSLIARRITEMKFVACASRDFLERHPVPQHPSDLEKNCYVVGYFLPK--QQMPFHFRRGN-EEIEVSGRYTMAANESTTYLAAARAGLGVIQAPLFMVREDLRNGTMVPVLPDWQVEPMPIYLVYPPNRHLSSRLRVFADWVVKVMAQSQN-------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3MZ1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -148580 for 1574 contacts (-94.4/contact) +
2D Compatibility (PS) -21769 + (NN) -7606 + (LL) 8560
1D Compatibility (HY) -13200 + (ID) 2950
Total energy: -185545.0 ( -117.88 by residue)
QMean score : 0.469
|
|
|