Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSQSATARQPEPEVAEAFRITPLEAPLGAEVRGLDARRPLAPEQVLALKQALREHHILVFR-QQHLDDEQYLRFATLFGSVFQPPADIPVLSSGGDGKVPDIVKVANTGDGELGNFALPAHIDHQWTPVPSSGSFLYALEVPSSGGETRFTNLARAYESLDEATRREIDGLRLINYNPFIRLREGGYGGGFATYRTPDIEPIQGSEHPLVRTHPESGRRVLFLSAHTEVEIPGYDPARGQALIGRLREHLARPELSYSHAWSVGDIVWWDNQAVLHARNAFPASERRRLKRISLAGSRPF
1OII Chain:C ((14-288))----------------ELDVHPVAGRIGAEIRGVKLSPDLDAATVEAIQAALVRHKVIFFRGQTHLDDQSQEGFAKLLGEPV---------------------------------RANSWHTDVTFVEAYPKASILRSVVAPASGGDTVWANTAAAYQELPEPLRELADKLWAVHSNEY------------------------ETEHPVVRVHPISGERALQL-GHFVKRIKGYSLADSQHLFAVLQGHVTRLENTVRWRWEAGDVAIWDNRATQHYAVDDYGTQPRIVRRVTLAGEVPV


General information:
TITO was launched using:
RESULT:

Template: 1OII.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -126742 for 1820 contacts (-69.6/contact) +
2D Compatibility (PS) -24181 + (NN) -15230 + (LL) 2044
1D Compatibility (HY) -10000 + (ID) 4000
Total energy: -178109.0 ( -97.86 by residue)
QMean score : 0.480

(partial model without unconserved sides chains):
PDB file : Tito_1OII.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1OII-query.scw
PDB file : Tito_Scwrl_1OII.pdb: