Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDIISDGIYNLIIFVLAV---YVGYHVVWNVTPALHTPLMAVTNAISAIVIVGAMLAAALTVTPLGKAMGTLAVALAAVNVFGGFLVT-----RRMLEMFKKKAPKAGGH
1V5O Chain:A ((1-102))
---GSSGSSGMLITVYCVRRDLTEVTFSLQVNPDFE-----LSNFRVLCELESGVPAEEAQIVYMEQLLTDDHCSLGSYGLKDGDMVVLLQKDNVGLRTPGRTPSGPSSG
General information:
TITO was launched using:
RESULT:
Template:
1V5O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -96152 for 550 contacts (-174.8/contact) +
2D Compatibility (PS) -9973 + (NN) 4530 + (LL) 776
1D Compatibility (HY) -3600 + (ID) 650
Total energy: -105069.0 ( -191.03 by residue)
QMean score : 0.189
(partial model without unconserved sides chains):
PDB file :
Tito_1V5O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1V5O-query.scw
PDB file :
Tito_Scwrl_1V5O.pdb
: