Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MESRILSLAALTVLELSPPDMVEAAARAGYSHVGLRLVPATVEEHHYPLLADAGLRRRTLARLRDSGVRTLDVEILRLRPDTRVGEFAAVLEVGAEFGARYVLVAGNDDDERRSADNFAALCDLARPLGLDPHLEFMPWTGIRDL--RQAARVVEAAARDNAGLLLDAFHFDRSASSLEDLRAIPPARLGYAQLCDVVGPRPTSMDEILRQAREERRFPGDGGLDLLALLRALPE---NLPLSLEVPALDLLARGVDGAERARLAIERTRALLARL |
3LMZ Chain:A ((16-256)) | -NPFHLGMAGYTFVNFDLDTTLKTLERLDIHYLCIKDFHLP-----L--NSTDEQIRAFHDKCAAHKVTGYAVGPIY---MKSEEEIDRAFDYAKRVGVKLIVGVPNY-------ELLPYVDKKVKEYDFHYAIHLHGPDIKTYPDATDVWVHTK-DLDPRIGMCLDVGHDLRNGCDPVADLKKYHTRVFDMHIKDVTDSSK----------AGVGIEIGRGKIDFPALIRMMREVNYTGMCSLEYEKDM-----KDPFLGIAESIGYFKAVSDLT |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3LMZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -96951 for 2041 contacts (-47.5/contact) +
2D Compatibility (PS) -26011 + (NN) -14123 + (LL) 2708
1D Compatibility (HY) -5200 + (ID) 1550
Total energy: -141127.0 ( -69.15 by residue)
QMean score : 0.467
|
|
|