Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRRAPMFKPLPITLQRGALRLEPLVEADIPELVSLAEAN-REALQYMD-G---PTRPDWYRQSLAEQ-R-EGRALPLAVRLGVQLVGTTRFAEFLPALPACEIGWTWLDQAQHGSGLNRMIKYLMLKHAFDNLRMVRVQLSTAASNLRAQGAIDKLGAQREGVLRNHRRLAGGRLDDTFVYSITDHEWPQVKAALEASFTG
3OWC Chain:A ((13-184))
------------------ELQLVPFQLGHFPILQRWFA-TEKELVQWAGPALRHPLSLEQMHEDLAESRRRPPLRLLWSACRDDQVIGHCQLLFDR-RNGVVRLARIVLAPSARGQGLGLPMLEALLAEAFADADIERVELNVYDWNAAARHLYRRAGFREEGLRRSATR-VGRERWNVVLMGLLRQEWAAGG---------
General information:
TITO was launched using:
RESULT:
Template:
3OWC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58110 for 1176 contacts (-49.4/contact) +
2D Compatibility (PS) -17414 + (NN) -3161 + (LL) 2040
1D Compatibility (HY) -5200 + (ID) 1750
Total energy: -83595.0 ( -71.08 by residue)
QMean score : 0.383
(partial model without unconserved sides chains):
PDB file :
Tito_3OWC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OWC-query.scw
PDB file :
Tito_Scwrl_3OWC.pdb
: