Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTSLMLEEALSAATVASRQLAVLDACLPALGQRLREVDPNLALTVARGSSDHAASYFAYLAMQHAGLPVASLPMSVVTLNRSPLRVAGQAVFAFSQSGQSPDLVDSLRILRERGALG-IALVNAEDSPLEAASEFVVPLCAGAERSVAATKSFIATLSASARLLAHWQR--------DNALLAAGQGLAAGLEQAARLDWSPAIEVL----RDCQRLMVIGRGAGYAIAQEAALKFKETSAIQAEAFSSAEVRHGPMALVEERYPLLVFAPRGPEQEGLLALAEDMRQRGAQVLLAAPDD---IAERDLPLQRAAH--PALDPILAIQSFYVMAAGLAEARGMDPDQPRHLSKVTRTH |
3OOJ Chain:B ((298-603)) | --------------------------------------------LACGTSYNSGMVSRYWFESLAGIPCDVEIASEFRYRKSAVR-RNSLMITLSQSGETADTLAGLRLSKELGYLGSLAICNVPGSSLVRESDLALMTNAGTEIGVASTKAFTTQLTVLLMLVAKLSRLKGLDASIEHDIVHGLQALPSRIEQM--LSQDKRIEALAEDFSDKHHALFLGRGDQYPIALEGALKLKEISYIHAEAYAAGELKHGPLALIDADMPVIVVAPNNELLEKLKSNIEEVRARGGQLYVFADQDAGFVSSDNMHIIEMPHVEEVIAPIFYTVPLQLLAYHVALIKGTDVDQPRNLAK----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OOJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -168776 for 2403 contacts (-70.2/contact) +
2D Compatibility (PS) -30906 + (NN) -15338 + (LL) 5076
1D Compatibility (HY) -19600 + (ID) 4800
Total energy: -234344.0 ( -97.52 by residue)
QMean score : 0.568
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